PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC018675.20
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 304aa    MW: 33340.6 Da    PI: 8.1445
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC018675.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.4e-1295138855
                   HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                    Er RR+++++ f++L  llP+ +     +K +K++i+ +Av+YIk+L+
  EcC018675.20  95 TERERRKKMRNMFANLHALLPHiP-----PKADKSTIVDEAVNYIKNLE 138
                   6*********************88.....8****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.68787137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-1590153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-1491150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.01E-1292142No hitNo description
PfamPF000101.2E-995138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-795143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550212.33E-5224277No hitNo description
Gene3DG3DSA:3.30.70.2606.3E-5226300No hitNo description
PROSITE profilePS516718.627228304IPR002912ACT domain
CDDcd048731.78E-4228262No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0000166Molecular Functionnucleotide binding
GO:0003676Molecular Functionnucleic acid binding
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MSEGGDHVAF PWKNPTWNFA KPDNSSNVGD RLGKKTACSS SHAQTAAEKE LRPVPTRKRS  60
RDMIKEGEDK SGKGELAANG AKTVGESDHE IHIWTERERR KKMRNMFANL HALLPHIPPK  120
ADKSTIVDEA VNYIKNLENT LQNLQKQKQE KYHCTAIFNC EPSTVVNSQS LASDSREAFL  180
ASQGSAAGNL PISAASSSAS SPVFRHPIAF QTWSSPNVVL NICGDEAMIS VCSPKKPGLF  240
TAICYVLEKH KIQVVSAQVS SDYSRSLYMI QAQVAGASDQ QAEVLPVEEI FKQAATEIMV  300
WTSP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010068480.10.0PREDICTED: transcription factor bHLH95
SwissprotQ9FXA32e-58BH095_ARATH; Transcription factor bHLH95
TrEMBLA0A059BC710.0A0A059BC71_EUCGR; Uncharacterized protein
STRINGVIT_03s0063g00170.t011e-117(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.15e-59bHLH family protein